Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKSLISNLILINSITLFLGFYLIYFSVNYVIKDYVHQMTRNSMQANFTILDSIYNNKKIPDENMVNQDSIFVWSYYAIFDQHYRMKYGTDNHKKESHDIIRYLTQKRLWQISKEKDGMFVTIKKKTYYVMTKDYSGILVDGSIKKVPKAQSQLFHVINFSDITYTQHLITKINHFLIVILVLTYIPMLFIMRKTFTGIRESIQSVQTYISSLWKNQGNHQSSQKEIVFSDFDPLLLESQEMANR-------IYQAEESQRNFFQNASHELRTPLMSIQGYTEGVQEGII--------D--AELAHSVILQE--SKKMKQLVDDIILLSKLDSNLS----DQKDEFSLNELLNSIIAYFKPLANKQK--------ISITYRPDKHEKLLKGNEELIQRAINNILSNALRYAVSH---------IEISYT----NQKLTISNDGPAISKEDLPYIFDRFYKG------HGGQTGIGLAMTKEIIKQHHGNIIAESDS-TSTTFTIYFNCHKIA |
2E0A Chain:A ((66-351)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRML-MNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52608 for 1627 contacts (-32.3/contact) +
2D Compatibility (PS) -24846 + (NN) -12123 + (LL) 18940
1D Compatibility (HY) -8800 + (ID) 1550
Total energy: -80987.0 ( -49.78 by residue)
QMean score : 0.383
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