Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKVQERRERKIKEAIKAKNWDEVTRLLQQEQSNAERRDRYHNRRIKDETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAEQGSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR
1RP3 Chain:A ((164-234))
-----------------------------------------------------------------------NVEEEVIKRELTEKVKEAVSKLPEREKLVIQLIFYEELPAKE----VA-KILETSVSRVSQLKAKALERLREMLSN--
General information:
TITO was launched using:
RESULT:
Template:
1RP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9665 for 420 contacts (-23.0/contact) +
2D Compatibility (PS) -7790 + (NN) -4473 + (LL) 6396
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -20132.0 ( -47.93 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_1RP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RP3-query.scw
PDB file :
Tito_Scwrl_1RP3.pdb
: