Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLNDRLKIEEMEEKYDSFKPRINALVEAIDDFQKHYEDYVKLREFYGSEDWFRLSEQTENNLKCGVLSEDQLFDFIGEHNELVGQFLDMSSQMYRHL
3EFG Chain:A ((10-53))
--QELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDL-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EFG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1446 for 168 contacts (8.6/contact) +
2D Compatibility (PS) -4738 + (NN) -1384 + (LL) 2804
1D Compatibility (HY) 800 + (ID) 350
Total energy: -1422.0 ( -8.46 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3EFG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EFG-query.scw
PDB file :
Tito_Scwrl_3EFG.pdb
: