Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ----MTPSLYNPLAIASKPFPAIYSEKILIFTIFSAFAEFERDMIVERTQEGKMLAKQNPDFREGRPKKFTKQQINHALTLL-ENHSYKQVEDMTGISVSTLVRAKKKKAAEAING 1AGQ Chain:A ((39-135)) NRGCVLTAIHLNVTDLGLGYE---TKEELIFRYCSGSCEAAET---MYDKILKNLSRSRVGQACCRPVAFDDD-----LSFLDDSLVYHILRKHSAKRCGCI--------------

General information: TITO was launched using: RESULT: Template: 1AGQ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 290 -16608 -57.27 -193.11 target 2D structure prediction score : 0.37 Monomeric hydrophicity matching model chain A : 0.66 3D Compatibility (PKB) : -57.27 2D Compatibility (Sec. Struct. Predict.) : 0.37 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.072

(partial model without unconserved sides chains): PDB file : Tito_1AGQ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1AGQ-query.scw PDB file : Tito_Scwrl_1AGQ.pdb: