Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------------MFSPQQPMRNYPQPGPPR-PMPNQRMMGRRPPNMRGPSFGAQQQGFQQAGQFLPQANAGARNGAGAGGGLKGMLSRFLPGGGGAGSAGVPGIPGA-------GAAASGGAGLQGIQNIANPASLSSMLGNVQK--VLGMAQQVTPMIQQYGPLVRNLPAMMKLYSQLSKSD-DTETEANEESEKQSVSEESSEKEKETETKTSDGNKKSKPKSSSLPKKSKTTDNKEQELKTSAPKKKEAASPAPKRTSGSSKPRLYI-----------------------
1Z2C Chain:B ((15-375))VLVLFEQMLVDMNLNEEKQQPLREKDIVIKREMVSQYLHTSSSRSAMMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDILKRLHDEKDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDDIRMEMDDFGEVFQIILNTVKDSKAEPHFLSILQHLLLVRNDYEARPQYYKLIEECVSQIVLHKNGTDPDF


General information:
TITO was launched using:
RESULT:

Template: 1Z2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 959 49142 51.24 198.96
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : 51.24
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.246

(partial model without unconserved sides chains):
PDB file : Tito_1Z2C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Z2C-query.scw
PDB file : Tito_Scwrl_1Z2C.pdb: