Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEQLIQAVNKQVANWTVMYVKLHNYHWYVKGKDFFTLHEKFEELYNETATYIDDLAERLLALNGKPIATMKESLETASVKEAAGNETAEQMVQSVYDDFTVIAEELKNGMDLADEVGDETTGDMLLAIHQNIEKHNWMLKAYLG
1JI5 Chain:C ((1-141))---QVIEVLNKQVADWSVLFTKLHNFHWYVKGPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQEAAYGETAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSDLLLGIYTELEKHAWMLRAFL-


General information:
TITO was launched using:
RESULT:

Template: 1JI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 581 -62864 -108.20 -445.84
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain C : 0.91

3D Compatibility (PKB) : -108.20
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.665

(partial model without unconserved sides chains):
PDB file : Tito_1JI5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JI5-query.scw
PDB file : Tito_Scwrl_1JI5.pdb: