Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENFIGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVAGRWVRDQEVNIVKLTEGVYKVSWTEPTGTDVSLNFMPNEKRMHGIIFFPKWVHEHPEITVCYQNDHIDLMKESREKYETYPKYVVPEFAEITFLKNEGVDNEEVISKAPYEGMTDDIRAGRL
4UU2 Chain:B ((9-158))LSGFVGKHLVYTYDNGWEYEIYVKNENTLDYRIHSGLVGNRWVKDQQAYIVRVGESIYKISWTAPTGTDVSLIVNLGDSLFHGTIFFPRWVMNNPEKTVCFQNDHIPLMNSYRDAGPAYPTEVIDEFATITFVRDCGANNESVIACAASE-----------


General information:
TITO was launched using:
RESULT:

Template: 4UU2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 776 -76310 -98.34 -508.73
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : -98.34
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.565

(partial model without unconserved sides chains):
PDB file : Tito_4UU2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UU2-query.scw
PDB file : Tito_Scwrl_4UU2.pdb: