Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSKKKQIKLGVFLAGTGHHVASWRHPDAPSDASMNLDYFKELAKTAERGKLDMLFLADSLSIDSKSHPNVLTRFEPFTLLSALAQVTSKIGLTATA-STT-YSEPFHIARQFASLDHLSNGRAGWNVVTSSIESTALNFSGEKHLEHHLRYQRAEEFVEIVKGLWDSWEEDAFIRNKETGEFFDKEKMHELNHKGEYFSVRGPLNVSRTPQGQPVIIQAGSSGDGKALAAKTAEVIFTAQNHLESAQ-EFYQSIKEQAAEFGRDPEKIAIMPGIFPIIADTEEAAQAKYKELQDLIIPSVGLQILQNYLGGIDLSAYPLDGPLPKLDAEASNAVKSRFKLVQEMAERDNMTIRELYKYVAGSRGHHIFVGTPEQLADKMQEWVDTKACDGFNIMPP--LLPEGIEVFVDQVVPILQERGVFRKEYEGTTLREHFGLEKPVNRYAK
1RHC Chain:A ((2-330))------KTQIGYFASLE----------------QYRPMDALEQAIRAEKVGFDSVWVDDHFHPWYHD---NAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTGEW--PSVPVRQDMTVEAVKVMRMLWESD--------------------KPVTFKGDYFTLDKAFLYTKPDD-EVPLYFSGMGPKGAKLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAVEALRFWAGCLVPS--M---FK-YK-----VYDPK----E------------VQ-----LHANLVHCDTI-------KENYMCATDAEEMIKEIERFKEA-GINHFCLGNSSPDVNFGIDIF-KEVIPAVRD----------------------------


General information:
TITO was launched using:
RESULT:

Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1870 -24454 -13.08 -75.47
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -13.08
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_1RHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RHC-query.scw
PDB file : Tito_Scwrl_1RHC.pdb: