Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKEFKAESKRLLDMMINSIYTQKEIFLRELISNSSDAIDKIYYKALTDDALTFDKDSYYIKVAADKDARTLTISDTGIGMTKDELEQHLGTIAKSGSLAFKKENELKDGHDIIGQFGVGFYAAFMVADVVTVISKALGSEEAYKWESAGADGYTIEPCEKDSV--GTDIILKIKENTEDDSYDEFLEEYRLKAIIKKYSDFIRYPIKMDTTINKPKEGSENEFEEVQEEQTVNSMVPIWRKNKSELTDEDYEKFYAEKHYGFDKPLTHVHISVDGAVRYNAILFVPENMPFDYYSKEYEKGLELYSNGVLIMNKCADLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNISKKIKSELQSLLKKDREKY-ETFYKSFGRQLKFGVYNDFGANKDQLKDLLLFYSSKEKK-LVSLDEYVSRMPEEQKFIYYATGDSYDRIEKLPQTEMVADKGYEILYFTEDIDEFAIKMLASYQEKEFKSVSSGDLGIDTDEDQKQSEEE-ESKYKDLFEEMKN-ILSDKVKNVRISKRLKSHPVCLAADG-EVTIEMEKILNAMP------DSQNVKA--EKVLEINPNHEVFQTLQDAFEQDKE--KLSLYTNLLYNQALLIEGLPIQDPVEFTNNICKVMV
2O1U Chain:B ((36-655))--------------KLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGT--------------------------VGFYSAFLVADKVIVTSKH-NNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASD-----YLELDTIKNLVKKYSQFINFPIYVWSS----KT--------VWDWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSA-----------YIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKT---LDMIKKIADEKYNDTFWKEFGTNIKLGVIEDH-SNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERML-


General information:
TITO was launched using:
RESULT:

Template: 2O1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2648 79616 30.07 144.23
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : 30.07
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_2O1U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2O1U-query.scw
PDB file : Tito_Scwrl_2O1U.pdb: