Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTGQPAARAADGR------EMLAQAIATTRGSYLVYN------------FGGGHPMPLL---NAGGHWYEMNNGGHLMIIKNA-----------------------------SQRLSPHLLVD----THTGDQARCEHNP-GARTGEGLWQASEIYPPLKAWQRMGRPTIAV--NANFFDVRGQKGGSWRSTGCSSPLGAYVDNTRGQGRANQAVTGTVAYAGKQGLSGGN-----ELWSSLTTMILPVGGAPYVLRPKSRQ-DYDLATPVIEDLLNKNARF---VAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQKDEMYIFQGGNYTPDNIQDLFRGLGSDTAILLDGGGSS------AIVLRRDTGGMWAGAGSPKGSCDTRQVLCDSHERALPSWLAFN |
| 4AN8 Chain:A ((8-500)) | LEKFNLIDEPWIPVLKGGRVVEVGIGEALLRAHEFARIETPSPLEEAVLHRLLLAVLHRALSGPRCPEDVLDWWRKGGFPQDPIRDYLNRFRDRFFLFHPEAPFLQVADLPEENPLPWSKLLPELANLPKATYAQAARALLVHQAFAPGGLLRRYGVGSAKDAPVARPALFLPTGQNLLETLLLNLVPYTPEDDAPIWEVPPLRLGDLEGARTKWPLTGRTRVYTWPARGVRLLDEGDGVRFMGYGPGVEPLEATHRDPMVAQRLDAKGNLLVLRLSEERSFWRDFSAMLPRQGGKVAATLEHAENLQGELEDEGLEGRITLRVLGQVSDQAKVLDIRREVYPLPSGLLTPKAEENLEKALKMAEELGQGLKHLAQEVAKAVVYLEELTKLANSLPLERLYWHALDGAFPRFFARVEEEASLDLWREALRGAALEAWKATRRFLGTGARHLKALAQGEQEFGRLLGEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38599 for 2551 contacts (-15.1/contact) +
2D Compatibility (PS) -38180 + (NN) -7237 + (LL) 0
1D Compatibility (HY) -400 + (ID) 2150
Total energy: -86566.0 ( -33.93 by residue)
QMean score : 0.127
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