Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDTMVTTDVIKSAVQLACRAPSLHNSQPWRWIAEDHTVALFLDKDRVLYATDHSGREALLGCGAVLDHFRVAMAAAGTTANVERFPNPNDPLHLASIDFSPADFVTEGHRLRADAILLRRTDRLPFAEPPDWDLVESQLRTTVT-------ADTVRIDVIA-DDMRPELAAASKLTESLRLYDSSYHAELFWWTGAFETSEGIPHSSLVSAAESDRVTFGRDFPVVANTDRRPEFGHDRSKVLVLSTYDNE--------------RASLLRCGEMLSAVLLDATMAGLATCTLTHITELHASRDLVAALIGQPATPQALVRVGLAPEMEEPPPATPRRPIDEVFHVRAKDHR |
| 3GFA Chain:A ((2-197)) | ---------------------------------------------------------------------------------------------------------------MISDSISKRRSIRK-YKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEI-NDNGL---LPGSRQ-------------HIA---------GA-NYT------VEIMKQAPVTIFILNILGKSPLEKLSPEERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAY---RELCEWLNTDSQLVAAISLGYPDEE---PSRRPRLQLSDVTEW------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74841 for 1293 contacts (-57.9/contact) +
2D Compatibility (PS) -18642 + (NN) -9437 + (LL) 9508
1D Compatibility (HY) -3600 + (ID) 1450
Total energy: -98462.0 ( -76.15 by residue)
QMean score : 0.335
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