Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRVAVPNKGALSEPATEILAEAGYRRRTDSKDLTVIDPVNNVEFFFLRPKDIAIYVGSGELDFGITGRDLVCDSG---------AQVRERLALGFGSSSFRYAAPAGRNWT-TADLAGMRIATAYPNLVRKDLATKGIEATVIRLDGAVEISVQLGVADAIADVVGSGRTLSQHDLVAFGEPLCDSEAVLIERAGTDGQD-QTEARDQ---LVARVQGVVFGQQYLMLDYDCPRSALKKATAITPGLESPTIAPLAD-PDWVAIRALVPRRDVNGIMDELAAIGAKAILASDIRFCRF |
| 4YB6 Chain:A ((7-299)) | RLRIAIQKSGRLSKESIELLSECGVKMHIHEQSLIAFSTNLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERQSLGENPSYKLLKKLDFGYCRLSLALPQENKFQNLKDFEGLRIATSYPQLLKRFMKENGINYKNCTLTGSVEVAPRANLADAICDLVSSGATLQANNLKEVK-VIYESRACLIQKENALS-KEKQALVDKIMLRVAGV---MQARESKYIMLHAPKEKLDKIQALLPGVERPTILPLAHDEKNVALHMVSKENLFWETMEALKEEGASSILVLPIEKML- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180728 for 2102 contacts (-86.0/contact) +
2D Compatibility (PS) -30445 + (NN) -8372 + (LL) 496
1D Compatibility (HY) -20400 + (ID) 4000
Total energy: -243449.0 ( -115.82 by residue)
QMean score : 0.505
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