Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKALTSSLLGLFAAPVLAGLLGAYVPLASAAPPKEIRIAVPDVSAGSSHSGGGVVDVLYTRQLLEKEFANDGIAVKWSFFKGAGPVVNEAFANGQVDFAYLGDLAAIIGKSGGLDSRLLAATAR-GVNHYLGVQPGSGIKTLEDLKGKRVGIFRGTASQLSFDNALASVGLSEKDLKVINLDFSAALSALAARQIDATWGLAG-LFALRDRGLAEIPLSTRDLNGAGTLQALLVGSGAFVDAHPDITERLLKVQLQAQDWLAREENRDAYIELVSKQASYPVVILQSEYRGRKLGDALSPRLDADFLGRLDASIQAAKRFGLIRREFSAEQWAAPELLEAAGKLAKAKAVAQAAE |
3KSX Chain:A ((25-313)) | -----------------------------AAEPAQLRIGYQKAV--------SSLVLAKQHRLLEQRF--PRTKITWVEFP-AGPQLLEALNVGSIDLGGAGDIPPLFAQAAGADLLYVGWVPPTPKAETILVPSKSALRTVADLKGKRIAFQKGSSAHNLLLRVLAKSGLSMRDITPLYLSPANARAAFAAGQVDAWAIWDPWYSALTLDGSARLLANGEG---LGLTGGFFLSSRRYATAWGPFVQQVMGTLNQADGLLE--RDRAGSIKTLAQVSGLPPAVVERTLAHRPPA-S-VQPLSAQVIKAQQATADLFYAQRLLPKRVLVAPAVWRA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153785 for 2499 contacts (-61.5/contact) +
2D Compatibility (PS) -30726 + (NN) -12440 + (LL) 4252
1D Compatibility (HY) -10000 + (ID) 3200
Total energy: -205899.0 ( -82.39 by residue)
QMean score : 0.545
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