Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESRILSLAALTVLELSPPDMVEAAARAGYSHVGLRLVPATVEEHHYPLLADAGLRRRTLARLRDSGVRTLDVEILRL-----------------RP---DTRVGEFAAVLEVGAEFGARYVLVAGND------DDERRSADNFAALCDLARPLGLDPHLEFMPWTGIRDLRQAARVVEAAARDNAGLLLDAFHFDRSA-SSLEDLRAIPPARLGYAQLCDVVGPRPTSMDEILRQAREERRFPGDGGLDLLALLRALPE---NLPLSLEVPALDLLARGVDGAERARLAIERTRALLARL |
3TVA Chain:A ((9-287)) | -PYWPIGVFTSVD--AGLGVHLEVAQDLKVPTVQVHAPHPHT--------RTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ----ESADHLLEFIEDVNRPNLGINFDPANMILYGTGNPIEALRKVARYVRSIHCKDALWAPVNER----GKSWGQEVALGTGDVGMEAYLTTLWEIGYRGPLTIEREIPHDP---VQQKKDLASALELLTGLRKKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107578 for 2018 contacts (-53.3/contact) +
2D Compatibility (PS) -27620 + (NN) -16757 + (LL) 1808
1D Compatibility (HY) 1600 + (ID) 1750
Total energy: -150297.0 ( -74.48 by residue)
QMean score : 0.488
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