Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIRPSLPLAGLLLAVALPLSAAQPGAAKGAPLSGCAAKQAAIEAKLETARSFANEGQVAGLEKALSEVKEHCTEAGLLRENKQKVIDSEREVSEREKDLRKAMGKGDPEKIEKRKAKLAEARAELEEAKKGLEQAQAQ
3VLC Chain:E ((30-83))
-----------------------------------------------------------------------------------KKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKA
General information:
TITO was launched using:
RESULT:
Template:
3VLC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21915 for 288 contacts (76.1/contact) +
2D Compatibility (PS) -6219 + (NN) -5429 + (LL) 6108
1D Compatibility (HY) -1200 + (ID) 450
Total energy: 14725.0 ( 51.13 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_3VLC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VLC-query.scw
PDB file :
Tito_Scwrl_3VLC.pdb
: