Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVLGLETSCDETGVALYDSERGLLADALFSQIDLHRVYGGVVPELASRDHVKRMLPLIRQVLDESGCTPADIDAIAYTAGPGLVGALLVGASCAQAMAFAWGVPAVGVHHMEGHL-LAPMLEEQPPRFPFVALLVSGGHTQLVRVDGIGRYQLLGESVDDAAGEAFDKTAKLIGLGYPGGPEIARLAERGTPGRFV-FPRPMTDRPGLDFSFSGLKTFTLNTWQRCVEAGDDSEQTRC-DIALAFQTAVVETLLIKCRRALKQTGLKNLVIAGGVSANQALRSGLEKMLGEMKGQVFYARPR-FCTDNGAMIAYAGCQRLLAGQHDGPAISVQPRWPMESLPAV |
| 2IVO Chain:D ((1-301)) | MLALGIEGTAHTLGIGIV-SEDKVLAN-VFDTLTTEK--GGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKMFGVKDP----VGLYVSGGNTQVLALEG-GRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGE--KYIELPYAV---KGMDLSFSGLLTEAIRKYR--------SGKYRVEDLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREML-RIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAGISFRLEETIVKQKFRTDEVEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203666 for 2640 contacts (-77.1/contact) +
2D Compatibility (PS) -32920 + (NN) -23963 + (LL) 920
1D Compatibility (HY) -25600 + (ID) 6000
Total energy: -291229.0 ( -110.31 by residue)
QMean score : 0.447
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