Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEATRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVRVLKEVLQTRMNFEMGVTEEMLAFAEEIRPAHSCLVPERREELTTEGGLDVAGQEQRIRDAVRRLAAVGSEVSLFIDPDPRQIEASARVGAPAIELHTGRYADAEDPEEQARELQRVREGVALGRSLGLIVNAGHGLHYHNVEPVAAIDGINELNIGHAIVAHALFVGFRQAVAEMKALMLAAATKR
1IXQ Chain:B ((3-240))
------LLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPE-------EGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLEARG--
General information:
TITO was launched using:
RESULT:
Template:
1IXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145432 for 2079 contacts (-70.0/contact) +
2D Compatibility (PS) -25500 + (NN) -11417 + (LL) 1544
1D Compatibility (HY) -24000 + (ID) 7650
Total energy: -212455.0 ( -102.19 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1IXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IXQ-query.scw
PDB file :
Tito_Scwrl_1IXQ.pdb
: