Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGPERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMATETDVALPAKPQAMQAFLTEYCGAAAGQIRVFGQNDWMAPPASGSSAPNAMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFYHQPQSVEDLVDFVVARILNTLGIPQDMLPRWGEQHLVSDE
4RHE Chain:B ((11-206))
-----KITLAITGASGASYAMRLIECLIAANYQLYILCSSAGRIVLDTEVGVKIPSSPDAASKFLTEKYQAKDQQITVFGKEQWFSPVASGSSAPKQMVVCPCSTGTMAAICHGMSDNLIERAADVVIKERGQLILMVRETPFSTLHLQNMLSLSQQGVTIMPASPGFYHKVETIEDLIDFMVGRVLDHLGIEQDIMPRWG--------
General information:
TITO was launched using:
RESULT:
Template:
4RHE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -176169 for 1612 contacts (-109.3/contact) +
2D Compatibility (PS) -21795 + (NN) -20253 + (LL) 608
1D Compatibility (HY) -24000 + (ID) 5350
Total energy: -246959.0 ( -153.20 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_4RHE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHE-query.scw
PDB file :
Tito_Scwrl_4RHE.pdb
: