Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLETLAVHAGYSPDPTTRAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTVAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIQARFAAHDDVAALEALIDERTKAVFCETIGNPAGNIIDLQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYMGGHGTSIGGIVVDSGKF-DWAANKSRFPLLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHCDNALAVARYLQQHPQVAWVKYAGLADNPEHALARRYLGGRPAA-ILSFGIQGGSAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNAEELARAGVSDDMVRLSIGIEHIDDILADLDQALAAAAR |
4OC9 Chain:O ((7-424)) | ---ETLALHGAYNFD-TQRSISVPIYQNTAYNFENLDQAAARFNLQELGNIYSRLSNPTSDVLGQRLANVEGGAFGIPVASGMAACFYALINLASSGDNVAYSNKIYGGTQTLISHTLKNFGIEAREFDIDDLDSLEKVIDQNTKAIFFESLSNPQIAIADIEKINQIAKKHKIVSICDNTVATPFLLQPFKHGVDVIVHSLSKYVSGQGTALGGALIERKDLNDLLKNNDRYKAFNTPDPSYHGLNLNTLDLP-IFSIRVIITWLRDLGASLAPQNAWLLLQGLETLAVRIEKHSQNAEKVANFLNSHPDIKGVNYPTLASNAYHNLFKKYFDKNFASGLLSFEAKDYEHA-RRICDKTQLFLLAANLGDSKSLIIHP-----------------ITKATIRLSIGLENSDDLIADLKQAIES--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OC9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -307948 for 3514 contacts (-87.6/contact) +
2D Compatibility (PS) -43070 + (NN) -20235 + (LL) 1992
1D Compatibility (HY) -34800 + (ID) 9200
Total energy: -413261.0 ( -117.60 by residue)
QMean score : 0.525
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