Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM
4M1S Chain:B ((2-169))
MTEYKLVVVGACGVGKSALTIQLIQNHFV---------SYRKQVVIDGETSLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKE---------------------
General information:
TITO was launched using:
RESULT:
Template:
4M1S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112507 for 1289 contacts (-87.3/contact) +
2D Compatibility (PS) -17782 + (NN) -8513 + (LL) 808
1D Compatibility (HY) -19600 + (ID) 7050
Total energy: -164644.0 ( -127.73 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_4M1S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M1S-query.scw
PDB file :
Tito_Scwrl_4M1S.pdb
: