Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
6DFR Chain:A ((1-159))
MISLIAALAVDRVIG-----PWNLPADLAWFKRNTLDKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
General information:
TITO was launched using:
RESULT:
Template:
6DFR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116082 for 1127 contacts (-103.0/contact) +
2D Compatibility (PS) -17048 + (NN) -10147 + (LL) 584
1D Compatibility (HY) -21600 + (ID) 7650
Total energy: -171943.0 ( -152.57 by residue)
QMean score : 0.759
(partial model without unconserved sides chains):
PDB file :
Tito_6DFR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-6DFR-query.scw
PDB file :
Tito_Scwrl_6DFR.pdb
: