Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGRNTWKTSAFSFLVEQMWAPLWSRSMRPGRWCSQRSCAWQTSNNTLHPLWTVPVSVPGGTRQSPINIQWRDSVYDPQLKPLRV---SYEAASCLYIWNTGYLFQVEFDDATEASGISGGPLENHYRLKQFHFHWGAVNEG-GSEHTVDGHAYPAELHLVHWNSVKYQNYKEAVVGENGLAVIGVFLKLGAHHQTLQRLVDILPEIKHKDARAAMRPFDPSTLLPT-CWDYWTYAGSLTTPPLTESVTWIIQKEPVEVAPSQLSAFRTLLFSAL--GEEEKMMVNNYRPLQPLMNRKVWASFQATNEGTRS |
| 1JD0 Chain:A ((3-262)) | ---------------------------------------KWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQG-----LQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144717 for 2035 contacts (-71.1/contact) +
2D Compatibility (PS) -26380 + (NN) -3469 + (LL) 2636
1D Compatibility (HY) -16800 + (ID) 4150
Total energy: -192880.0 ( -94.78 by residue)
QMean score : 0.343
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