Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES
3E27 Chain:D ((2-188))
-RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE-
General information:
TITO was launched using:
RESULT:
Template:
3E27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144118 for 1485 contacts (-97.0/contact) +
2D Compatibility (PS) -20673 + (NN) -14930 + (LL) 180
1D Compatibility (HY) -29600 + (ID) 9300
Total energy: -218441.0 ( -147.10 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_3E27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E27-query.scw
PDB file :
Tito_Scwrl_3E27.pdb
: