Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRSCPSFSASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
2QRN Chain:C ((40-280))
-------------------RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQS-------------NGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2QRN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118670 for 1752 contacts (-67.7/contact) +
2D Compatibility (PS) -24297 + (NN) -9364 + (LL) 1456
1D Compatibility (HY) -35600 + (ID) 11400
Total energy: -197875.0 ( -112.94 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2QRN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QRN-query.scw
PDB file :
Tito_Scwrl_2QRN.pdb
: