Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPPSISAFQAAYIGIEVLIALVS---VPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPL-AILINIGPQTY--FHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVAIAGCWILSFVVGLTP--MFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMV---YFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALILFLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIWNDHFRCQPAPPIDEDLPEERPDD |
| 2YCW Chain:B ((13-296)) | -------------GMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVT-ASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDP-----QALKCYQDPGC-CDF--VTNRAYAIASSIISFYI----PLLIMIFVALRVYREAKEQI-RKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDL-VPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF--------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -257226 for 1991 contacts (-129.2/contact) +
2D Compatibility (PS) -28270 + (NN) -13131 + (LL) 3260
1D Compatibility (HY) -32000 + (ID) 5100
Total energy: -332467.0 ( -166.98 by residue)
QMean score : 0.308
|
|
|