Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALSSENCSFQYQLRQTNQPLDVNYLLFLIILGKILLNILTLGMRRK-NTCQNFMEYFCISLAFVDLLLLVNISIILYFRDFVLLSIRFTKYHICLFT---QIISFTYGFLHYPVFLTACIDYCLNFSKTTKLSFKCQKLFYFFTVILIWISVLAYVLGDPAIYQSLKAQNA-YSRHCPFYVSI------QSYW--LSFFMVMILFVAFITCWEEVTTLVQAIRITSYMNETILYFPFSSHSSYTVRSKKIFLSKLIVCFLSTWLPFVLLQVIIVLLKV----------QIPAYIEMNIPWLYFVNSFLIATVYWFNCHKLNLKDIGLPLDPFVNWKCCFIPLTIPNLEQIEKPISIMIC |
| 2LNL Chain:A ((43-317)) | ------------------------IIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAA-SK--VNGWIF-GTFLCKVVSLLKEVNFYSGILLL---ACISVDRYLAIVHATRTLTQ-KRHLVKFVCLGCWGLSMNLSLP-F-FLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMG------------------QKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG--------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -231150 for 1777 contacts (-130.1/contact) +
2D Compatibility (PS) -25464 + (NN) -3312 + (LL) 5044
1D Compatibility (HY) -16000 + (ID) 1950
Total energy: -272832.0 ( -153.54 by residue)
QMean score : 0.283
|
|
|