Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNASNDSQSEDCETRQWLPPGESPAISSVMFSAGVLGNLIALALLARRWRGDVGCSAGRRSSLSLFHVLVTELVFTDLLGTCLISPVVLASYARNQTLVALAPESRACTYFAFAMTFFSLATMLMLFAMALERYLSIGHPYFYQRRVSRSGGLAVLPVIYAVSLLFCSLPLLDYGQYVQYCPGTWCFIRHGR--TAYLQLYATLLLLLIVSVLACNFSVILNLIRMHRRSRRSRCGPSLGSG---------------------------------------------------------------------------------------------------------------------------R----------GGPGARRRGERVSMAEETDHLILLAIMTITFAVCSLPFTIFAYMNETSSR----KEKWDLQALRFLSINSIIDPWVFAILRPPVLRLMRSVLCCRISLRTQDATQTSCSTQSDASKQADL |
| 3V2Y Chain:A ((60-495)) | -----------------ENSIKLTSVVFILICCFIILENIFVLLTIWKT-----------KKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGA--TTYKL---TPAQWFLREGSMFVALSASVFSLLAIAIERYITMLK--------NNFRLFLLISACWVISLILGGLPIMGWNCIS---ALSSCSTVLPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPL------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212354 for 2074 contacts (-102.4/contact) +
2D Compatibility (PS) -30325 + (NN) -14582 + (LL) 3048
1D Compatibility (HY) -18800 + (ID) 2050
Total energy: -275063.0 ( -132.62 by residue)
QMean score : 0.332
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