Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MITFLPIIFSILVVVT-FVIGNFANGFIALVNSTEWVKRQKISFADQIVTALAVSR-VGLLWVLLLNWYST-VLNPAFCSVELRTTAYNIWAVTGHFSNWPATSLSIFYLLKIANFSNLIFLRLKRRVKSVILVVLLG-PL-LFLACHLFVVNMNQIVWTKE-YEGNMTWKIKLRRAMYLSDTTVTMLANLV-PFTVTLISFLLLVCSLCKHLKKMQ----------LHGKGSQDPSTK-VHIKVLQTVISFFLLRAIYF-VSVIISVWSFKNLENKPVFMFCQAIGFSCSSAHPFILIWGNKKLKQTYLSVLWQMRY |
| 3GN6 Chain:A ((22-321)) | FNPWTDAALDTIVNQALTLYAEMRVVPAHHDAFLAAIDTVSAKLRVLPG-----FLSLALKQMSGD---------STMVKNYPETYKGVLATAYLDGVAAGTQPYF------YNLFVRFADGRAARAAGFEALFETHIHPLLHAMADGPELLAYRAVLQSVVAGDRHAIYRGAEEIRSFLRRPVELPERETVTVENHVMVPEDKHAAWEPQVAILLQVAQDTFEPQDEPSGVGLPGARDNRYYRKALSTEILRNAHADGGLRA-YIMHGVWESVWDHENSHLDPRFLAAAGPVGAAAVVGPVEPFYLTRRLVVAD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206817 for 2124 contacts (-97.4/contact) +
2D Compatibility (PS) -28414 + (NN) -2531 + (LL) 3316
1D Compatibility (HY) 8800 + (ID) 2350
Total energy: -227996.0 ( -107.34 by residue)
QMean score : 0.154
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