Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLFYFSAIIASVILNFVGIIMNLFITVVNCKTWVKSHRISSSDRILFSLGITRFLMLGLFLVNTIYFVSSNTERSVYLSAFFVLCFMFLDSSSVWFVTLLNILYCVKITNFQHSVFLLLKRNISPKIPRLLLACVLISAFTTCLYITLSQASPFPELVTTRNNTSFNISEGILSLVVSLVLSSSLQFIINVTSASLLIHSLR--RHIQKMQKNATGFWN-PQTEAHVGAMKLMVYFLILYIPYSVATLVQYLPFYAGMDMGTKSIC-LIFATLYSPGHSVLIIITHPKLKTTAKKILCFKK |
| 2W1N Chain:A ((10-237)) | -------AEVTGSVSLEALE-------------------EVQVGENIEVGVGIDELVNAEAF---AYDFTLNYDE-----NAFEYVEAISDDGVFVNAKKIEDGKVRVLVSSLTGEPL--------PAKEVLAKVVLRAEAKTEGSNLSVT-------------NSSVGDGEGLVHEIAG---TEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEG------LEGYILYKDGKKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGE----VSSKESLTLRTA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239041 for 1620 contacts (-147.6/contact) +
2D Compatibility (PS) -24475 + (NN) -3333 + (LL) 7772
1D Compatibility (HY) -1600 + (ID) 2100
Total energy: -262777.0 ( -162.21 by residue)
QMean score : 0.092
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