Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MEGISNFKTPSKLSEKKKSVLCSTPTIN------IPASPFMQ---KLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV-------------------- |
| 4DN5 Chain:A ((8-351)) | SVEEYLVHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTG---FQCAVKKVRL----------EVFRAEELMACAGLTSPRIVPLYGAVREGP-WVNIFMELLEGGSLGQLVKEQ-----GCLPEDRALYYLGQALEGLEYLHSRRIL-HGDVKADNVLLSSDGSHAALCDFGHAVCLQ-----------IPGTETHMAPEVVLGRSC-DAKVDVWSSCCMMLHMLNGCHPW----------------TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQVGGLKSPWRGEYKEPRHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92516 for 2302 contacts (-40.2/contact) +
2D Compatibility (PS) -30777 + (NN) -27407 + (LL) 2196
1D Compatibility (HY) -8000 + (ID) 2950
Total energy: -159454.0 ( -69.27 by residue)
QMean score : 0.416
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