Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLVGVASPEPGTAAAWGPSKCPWAIPQNTISCSLADVMSEQLAKELQLEEEAAVFPEVAVAEGPFITGENIDTSSDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVHPYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFIGKGKDITTKHDEVVCGRKNTARMENFAPEFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLN--SEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQKGGVKEALSERELFNAVSGLNITADNEADFLAEIEALEKMNEDHVQKNGRKAASFLKDDGDPPLLYDE |
1ZTH Chain:A ((25-257)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIYAEVLDGRTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVF------DGKPVA--MAVKIYRI-------MDEYLYGDERFDM------PKEKVFIWTEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID-KVYFIDMGQAVTLRHPMAESYLERDVRNIIRFFSKYGVKA--DFEEMLKEVKGE------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137546 for 1751 contacts (-78.6/contact) +
2D Compatibility (PS) -24357 + (NN) -15870 + (LL) 17104
1D Compatibility (HY) -19600 + (ID) 4150
Total energy: -184419.0 ( -105.32 by residue)
QMean score : 0.575
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