Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGSGCAWGAEPPRFLEAFGRLWQVQSRLGSGSSASVYRVRCCGNPGSPPGALKQFLPPGTTGAAASAAEYGFRKERAALEQLQGHRNIVTLYGVFTIHFSPNVPSRCLLLELLDVSVSELLLYSSHQGCSMWMIQHCARDVLEALAFLHHEGYVHADLKPRNILWSA------------ENECFKLIDFGLSFKEGNQDVKYIQTDGYRAPEAELQNCLAQAGLQSDTECTSAVDLWSLGIILLEMFSGMKLKHTVRSQEWKANSSAIIDHIFASKAVVNAAIPAYHLRDLIKSMLHDDPSRRIPAEMALCSPFF-----SIPFAPHIEDLVML-----PTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPKENPGRGQVFVEYANAGDSKAAQKLLTGRMFD--GKFVVATFYPLSAY-KRGYLYQTLL-- |
| 2RIO Chain:A ((8-434)) | -------------NFEQSLKNLVVSEKILGYGSSGT---VVFQGSFQGRPVAVKRML---------IDFCDIALMEIKLLTESDDHPNVIRYYCSET-----TDRFLYIALELCNLNLQDLVESKYN-------PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS-------TSGWRAPELLEES----NNLQTKRRLTRSIDIFSMGCVFYYILSKGK--HPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSGDWTVKFDKTFMDRKYHSSKLMDLLRALRNKYHHFMDLPEDIAELMGPVPDGFYDYFTKRFPNLLIGVYMIVKENLSDDQILREFLYS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176183 for 2927 contacts (-60.2/contact) +
2D Compatibility (PS) -38408 + (NN) -11525 + (LL) 2640
1D Compatibility (HY) -18400 + (ID) 3950
Total energy: -245826.0 ( -83.99 by residue)
QMean score : 0.319
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