Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVNSALSPCISYARGNSANPSAACCSGVRRLAGAVRSTTDKKTTCNCIKSAAG-------GLS-----AGKAADIPSKCSVSIPYAISPSLDCSTIR
3OB4 Chain:A ((428-485))
-------------------------QERCCNELNEFEN------NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8903 for 249 contacts (-35.8/contact) +
2D Compatibility (PS) -4736 + (NN) -236 + (LL) 2012
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -14613.0 ( -58.69 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: