Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSCGQVSSALSPCISYARGNG---A------------SPSVACCSGVRSLASSARSTADKQAACKCIKSAAAGL-------------NAGKAAGIPTKCGVSVPYAISSSVDCSKIR
1SM7 Chain:A ((14-101))
---------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37497 for 414 contacts (-90.6/contact) +
2D Compatibility (PS) -6174 + (NN) -165 + (LL) 1816
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -45520.0 ( -109.95 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: