Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVQCGQVMQLMAPCMPYLA----GAPGMTP----YGICCDSLGVLNRMAPAPADRVAVCNCVKDAAAGFP-------A---V-D---------FSRASAL--PAACGLSISFTIAPNMDCNQVTEELRI
1BEA Chain:A ((15-110))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS-----------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60203 for 396 contacts (-152.0/contact) +
2D Compatibility (PS) -6314 + (NN) 2158 + (LL) 2580
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -63729.0 ( -160.93 by residue)
QMean score : 0.242
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: