Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------DEMMGRCMHEIANCLVAIDK-GTKLPS-YCCGRMVKPQPCACKYFIKNPVLLPRLLIACRVPHPKC
3C0F Chain:B ((3-87))
IMDEIVNLQKEVSLEEAERYANIASYGDGILLSVHDSTGYRAPEVYCCGEKPWEVYACNRGA--NLISVNQFEFYFRIEVEG-
General information:
TITO was launched using:
RESULT:
Template:
3C0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29751 for 369 contacts (-80.6/contact) +
2D Compatibility (PS) -6162 + (NN) 450 + (LL) 324
1D Compatibility (HY) 1200 + (ID) 450
Total energy: -34389.0 ( -93.20 by residue)
QMean score : 0.150
(partial model without unconserved sides chains):
PDB file :
Tito_3C0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C0F-query.scw
PDB file :
Tito_Scwrl_3C0F.pdb
: