Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DGAGECGATPPDKMALKLAPCASAAKDPK----S--TPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR---NA--------GIKPEVAITIPKRCNIADRPVGYKCGDYTLP
1HSS Chain:A ((16-105))
----------------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVV-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27561 for 413 contacts (-66.7/contact) +
2D Compatibility (PS) -6322 + (NN) -97 + (LL) 320
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -38260.0 ( -92.64 by residue)
QMean score : 0.191
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: