Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EDCTVDLKGLIRECKQYVMFPAS----PK---ITPS-------SACCSVVQKV--NSPCLCSKVTKEIEKVVC-----------MDKVVYVADYYKNPLKPGSDCGSYHVPSQRR
1W2Q Chain:A ((25-112))
----------LKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR-----------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18033 for 348 contacts (-51.8/contact) +
2D Compatibility (PS) -6289 + (NN) -2344 + (LL) 656
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -30060.0 ( -86.38 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: