Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATTSEAAVTCGQVSSAIGPCLSYARGQ----GS--------GPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIR-G----LNVGKAASIPSKCGVSIPYTISTSTDCSRVS
1S6D Chain:A ((19-97))
--------------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLD--------EKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM---------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33018 for 401 contacts (-82.3/contact) +
2D Compatibility (PS) -6182 + (NN) -324 + (LL) 2232
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -41342.0 ( -103.10 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: