Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----ACNPSELMACASSILQSKPPTAQCCAKLKEQQPCFCQYKKDPSLKGYINPANFKKVAACRVQVPKC
1TC3 Chain:C ((1-51))
PRGSALSDTERAQ-LDVMKLLNVSLHEMSRKISRSRHCIRVYLKDPV--SYGTS----------------
General information:
TITO was launched using:
RESULT:
Template:
1TC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11658 for 281 contacts (-41.5/contact) +
2D Compatibility (PS) -5109 + (NN) -4714 + (LL) 1740
1D Compatibility (HY) -800 + (ID) 450
Total energy: -20991.0 ( -74.70 by residue)
QMean score : 0.362
(partial model without unconserved sides chains):
PDB file :
Tito_1TC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TC3-query.scw
PDB file :
Tito_Scwrl_1TC3.pdb
: