Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASSCNPSALSACAPALFGRAVTLGCCASLRAQQPCLCQYKRDPANRAYVNGPAAQRFTRACGLTQMKC
2JRM Chain:A ((1-60))
--------MKRQKRDRLERAQSQGYKAGLNGRSQEACPYQQVDARSYWLGGWRDARDEKQSGLYKLEH
General information:
TITO was launched using:
RESULT:
Template:
2JRM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15847 for 360 contacts (-44.0/contact) +
2D Compatibility (PS) -5704 + (NN) 1543 + (LL) 40
1D Compatibility (HY) 0 + (ID) 600
Total energy: -20568.0 ( -57.13 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_2JRM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JRM-query.scw
PDB file :
Tito_Scwrl_2JRM.pdb
: