Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTSPSQCKEERNL--LVNACRPVIYGR----S-------------PSADCCQRVRVSHVECVCPYVTPKTASIIG-----VI----GVDNVVKKIEGCGRTVPRKFKCGSITTP
1SM7 Chain:A ((2-103))
---PQKCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGT---------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23165 for 531 contacts (-43.6/contact) +
2D Compatibility (PS) -7231 + (NN) 1594 + (LL) 168
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -30934.0 ( -58.26 by residue)
QMean score : 0.132
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: