Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
INCDNDLIGLASKCQKYVVK----QGSSAK---PSPECCKVVKNVNVPCVCSHVTKQIEDLI-------------S-------M--KKVFDV--AKSCGKKVTPGTKCGSYTVPN
1BEA Chain:A ((18-111))
-----------PSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISG----------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15232 for 365 contacts (-41.7/contact) +
2D Compatibility (PS) -6347 + (NN) -1070 + (LL) 564
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -25435.0 ( -69.68 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: