Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADDDAVLLCNMTRGGLEACKPSVRSGS---SD-P-A------ADPSKECCAALAGADLPCLCSYRHSFLLPS-----LG-----IDPDLALQLPAKCNLTATPGC
1SM7 Chain:A ((14-104))
--------------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTC
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37127 for 474 contacts (-78.3/contact) +
2D Compatibility (PS) -7354 + (NN) -1450 + (LL) 768
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -48413.0 ( -102.14 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: