Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DFSALAPCD--VTQLTPCASAFAGKAS-PTAACCAKLLSHG------------PGCLCRYKDD-ASLKRLVDARHKRRVFTACKVPVP-------SC----
1FK5 Chain:A ((1-93))
----AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSG----LNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21278 for 399 contacts (-53.3/contact) +
2D Compatibility (PS) -6708 + (NN) -4111 + (LL) 688
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -35109.0 ( -87.99 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: