Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GETRWAEAAVTCN--PIELIPCLAAVMSSTP-PSETCCSRLREQTPCFCGYLNDPS------------LRQF--ADNPIIRTVGNACGVAYP-------QC----
1FK5 Chain:A ((1-93))
--------AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNA----ARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31521 for 365 contacts (-86.4/contact) +
2D Compatibility (PS) -6436 + (NN) 1042 + (LL) 740
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -38925.0 ( -106.64 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: