Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSSSSCTNVLVSMSPCLDYIQGNS---SKP---SSSCCSQLANVVRSQPQCLCEVLNG--GA-S-SLGVS--------VNQTQAMALPTACNVKTPPASQCNATIL
1HSS Chain:A ((16-103))
-----------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31539 for 365 contacts (-86.4/contact) +
2D Compatibility (PS) -6014 + (NN) -424 + (LL) 1388
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -41239.0 ( -112.98 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: