Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSAAECKQERKI--LVNACKAVITRK----P-------P------TPYCCERLRVTHVSCVCPVITPQLAALI------------DVNYAIKVIQGCGIQVPRHSKCGSITTP
1SM7 Chain:A ((3-103))
---QKCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGT---------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56252 for 501 contacts (-112.3/contact) +
2D Compatibility (PS) -6880 + (NN) 161 + (LL) 296
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -66275.0 ( -132.29 by residue)
QMean score : 0.398
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: