Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAPAPEPTAEAPGPDCFTNLLSLSDCLTYVEAGSN-LTK---PEKPCCPELAGLVESTPQCLCYLLDKNATS---SYGF--------NIDMNRALNLPTVCKVSTPPVSLCSG
1HSS Chain:A ((16-103))
---------------------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI--------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29214 for 414 contacts (-70.6/contact) +
2D Compatibility (PS) -6512 + (NN) -638 + (LL) 664
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -39600.0 ( -95.65 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: