Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DVNQDKTECANQLVGLASCLPYVGGQ---SKTP---TIDCCSGLKQVLDKSRKCLCVLIKDRDDP---SLG--L----K-INATLAATLPSTCHAPVNMTECI
1HSS Chain:A ((16-103))
--------------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPI------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43359 for 397 contacts (-109.2/contact) +
2D Compatibility (PS) -6266 + (NN) 200 + (LL) 1444
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -52481.0 ( -132.19 by residue)
QMean score : 0.203
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: